Transcript: lnc-RNF26-1:3

Basic information

LNCipedia transcript ID: lnc-RNF26-1:3 
LNCipedia gene ID: lnc-RNF26-1
Location (hg38): chr11:119729566-119746607
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1000 bp
Exons: 5
Sources: Sun and Gadad et al., 2015
Alternative transcript names: LncRNA254:1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -259.364 non-coding 
CPAT coding probability 25.54% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-RNF26-1:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 lnc-CTD-2523D13.1.1-1:8
4.1 lnc-CTD-2523D13.1.1-1:8
5.0 lnc-CTD-2523D13.1.1-1:8
5.1 lnc-HINFP-10:2
5.2 lnc-RNF26-1:3