Transcript: lnc-RNASEH2B-5:1

Basic information

LNCipedia transcript ID: lnc-RNASEH2B-5:1 
LNCipedia gene ID: lnc-RNASEH2B-5
Location (hg38): chr13:50702552-50711819
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1466 bp
Exons: 4
Sources: Nielsen et al.,2014
Alternative transcript names: l_845_chr13:51276687-51285368_prostate
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -78.3797 non-coding 
CPAT coding probability 0.84% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-RNASEH2B-5:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-RNASEH2B-5:1
4.0 lnc-RNASEH2B-5:1
4.1 lnc-RNASEH2B-5:1
5.0 lnc-RNASEH2B-5:1
5.1 lnc-KL-199:1
5.2 lnc-RNASEH2B-5:1