Transcript: lnc-RHOXF1-3:7

Basic information

LNCipedia transcript ID: lnc-RHOXF1-3:7 
LNCipedia gene ID: lnc-RHOXF1-3
Location (hg38): chrX:120240215-120245232
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 610 bp
Exons: 2
Sources: Sun and Gadad et al., 2015
Alternative transcript names: LncRNA1470:1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -216.133 non-coding 
CPAT coding probability 57.92% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-RHOXF1-3:7 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 lnc-RHOXF1-3:7
4.1 lnc-RHOXF1-3:7
5.0 lnc-RHOXF1-3:7
5.1 lnc-CT47A8-10:7
5.2 lnc-RHOXF1-3:7