Transcript: lnc-RHBDD3-3:6

Basic information

LNCipedia transcript ID: lnc-RHBDD3-3:6 
LNCipedia gene ID: lnc-RHBDD3-3
Location (hg38): chr22:29181703-29205832
Strand: -
Class: bidirectional
Sequence Ontology term:
Transcript size: 1071 bp
Exons: 5
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000058394.1|MICT00000231760.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 6.9825 non-coding 
CPAT coding probability 1.52% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-RHBDD3-3:6 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-RHBDD3-3:6
5.0 lnc-RHBDD3-3:6
5.1 lnc-PITPNB-25:2
5.2 lnc-RHBDD3-3:6