Transcript: lnc-RGMA-9:1

Basic information

LNCipedia transcript ID: lnc-RGMA-9:1 
LNCipedia gene ID: lnc-RGMA-9
Location (hg38): chr15:94583555-94584987
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 583 bp
Exons: 3
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00023797; NONHSAT050161
Alternative gene names: XLOC_011590; linc-RGMA-8


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -161.435 non-coding 
CPAT coding probability 8.93% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-RGMA-9:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-RGMA-7:1
3.1 lnc-RGMA-9:1
4.0 lnc-RGMA-9:1
4.1 lnc-RGMA-9:1
5.0 lnc-RGMA-9:1
5.1 lnc-CIB1-48:1
5.2 lnc-RGMA-9:1