Transcript: lnc-RFC3-7:6

Basic information

LNCipedia transcript ID: lnc-RFC3-7:6 
LNCipedia gene ID: lnc-RFC3-7
Location (hg38): chr13:33542566-33548948
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 4169 bp
Exons: 3
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000014288.1|ENCT00000111470.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -4.6649 non-coding 
CPAT coding probability 2.81% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-RFC3-7:6 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-RFC3-7:6
5.0 lnc-RFC3-7:6
5.1 lnc-KL-7:4
5.2 lnc-RFC3-7:6