Transcript: lnc-RETREG3-1:1

Basic information

LNCipedia transcript ID: lnc-RETREG3-1:1 
LNCipedia gene ID: lnc-RETREG3-1
Location (hg38): chr17:42576677-42577672
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 838 bp
Exons: 2
Sources: NONCODE v4
Alternative transcript names: NONHSAT053736
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 107.1221 coding 
CPAT coding probability 4.44% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-RETREG3-1:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-FAM134C-1:4
4.0 lnc-FAM134C-1:4
4.1 lnc-FAM134C-1:4
5.0 lnc-FAM134C-1:4
5.1 lnc-BRCA1-19:1
5.2 lnc-RETREG3-1:1