Transcript: lnc-RERE-4:2

Basic information

LNCipedia transcript ID: lnc-RERE-4:2 
LNCipedia gene ID: lnc-RERE-4
Location (hg38): chr1:8871352-8878676
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 826 bp
Exons: 3
Sources: NONCODE v4
Alternative transcript names: NONHSAT000768
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 4 non-coding 
PhyloCSF score 1149.8078 coding 
CPAT coding probability 10.50% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-RERE-4:2 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-RERE-4:2
4.0 lnc-RERE-4:2
4.1 lnc-RERE-4:2
5.0 lnc-RERE-4:2
5.1 lnc-CLSTN1-16:2
5.2 lnc-RERE-4:2