Transcript: lnc-REG3G-3:2

Basic information

LNCipedia transcript ID: lnc-REG3G-3:2 
LNCipedia gene ID: lnc-REG3G-3
Location (hg38): chr2:78093577-78095842
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 409 bp
Exons: 3
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00003745; NONHSAT071844
Alternative gene names: XLOC_001543; linc-REG3G-2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -150.5737 non-coding 
CPAT coding probability 4.33% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-REG3G-3:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-REG3G-3:2
3.1 lnc-REG3G-3:2
4.0 lnc-REG3G-3:2
4.1 lnc-REG3G-3:2
5.0 lnc-REG3G-3:2
5.1 lnc-POLE4-78:2
5.2 lnc-REG3G-3:2