Transcript: lnc-RDH14-2:1

Basic information

LNCipedia transcript ID: lnc-RDH14-2:1 
LNCipedia gene ID: lnc-RDH14-2
Location (hg38): chr2:18423534-18425304
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 432 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00004157; NONHSAT069367
Alternative gene names: XLOC_002003; linc-SMC6


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -221.6847 non-coding 
CPAT coding probability 3.19% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-RDH14-2:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-RDH14-1:1
3.1 lnc-RDH14-2:1
4.0 lnc-RDH14-2:1
4.1 lnc-RDH14-2:1
5.0 lnc-RDH14-2:1
5.1 lnc-RAD51AP2-8:1
5.2 lnc-RDH14-2:1