Transcript: lnc-RCL1-4:4

Basic information

LNCipedia transcript ID: lnc-RCL1-4:4 
LNCipedia gene ID: lnc-RCL1-4
Location (hg38): chr9:4741373-4753243
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 5272 bp
Exons: 3
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000104592.1|MICT00000355225.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 1.1971 non-coding 
CPAT coding probability 4.42% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-RCL1-4:4 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-RCL1-4:4
5.0 lnc-RCL1-4:4
5.1 lnc-RECK-270:3
5.2 lnc-RCL1-4:4