Transcript: lnc-RBP5-2:4

Basic information

LNCipedia transcript ID: lnc-RBP5-2:4 
LNCipedia gene ID: lnc-RBP5-2
Location (hg38): chr12:7187978-7189519
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1542 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000255572.1|ENCT00000098569.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -109.1963 non-coding 
CPAT coding probability 5.53% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-RBP5-2:4 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-RBP5-2:4
5.0 lnc-RBP5-2:4
5.1 lnc-CHD4-51:3
5.2 lnc-RBP5-2:4