Transcript: lnc-RBM12B-2:5

Basic information

LNCipedia transcript ID: lnc-RBM12B-2:5 
LNCipedia gene ID: lnc-RBM12B-2
Location (hg38): chr8:93911387-93916639
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 5253 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000264448.2|ENCT00000438102.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -96.6974 non-coding 
CPAT coding probability 2.82% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-RBM12B-2:5 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-RBM12B-2:5
5.0 lnc-RBM12B-2:5
5.1 lnc-ZNF706-169:4
5.2 lnc-RBM12B-2:5