Transcript: lnc-RBL1-3:1

Basic information

LNCipedia transcript ID: lnc-RBL1-3:1 
LNCipedia gene ID: lnc-RBL1-3
Location (hg38): chr20:36925972-36943061
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 2553 bp
Exons: 5
Sources: Nielsen et al.,2014
Alternative transcript names: l_2107_chr20:35554374-35571088_thyroid
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 6.0923 non-coding 
CPAT coding probability 0.10% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-RBL1-3:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-RBL1-3:1
4.0 lnc-RBL1-3:1
4.1 lnc-RBL1-3:1
5.0 lnc-RBL1-3:1
5.1 lnc-EIF6-28:1
5.2 lnc-RBL1-3:1