Transcript: lnc-RBBP9-4:2

Basic information

LNCipedia transcript ID: lnc-RBBP9-4:2 
LNCipedia gene ID: lnc-RBBP9-4
RefSeq ID: NR_109955
Location (hg38): chr20:18674395-18698708
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1694 bp
Exons: 4
Sources: Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_109955; NR_109955.1
Alternative gene names: LOC101929526


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -70.645 non-coding 
CPAT coding probability 7.48% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-RBBP9-4:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-C20orf78-2:2
4.0 lnc-C20orf78-2:2
4.1 lnc-C20orf78-2:2
5.0 lnc-C20orf78-2:2
5.1 lnc-RRBP1-30:2
5.2 lnc-RBBP9-4:2