Transcript: lnc-RBBP6-4:2

Basic information

LNCipedia transcript ID: lnc-RBBP6-4:2 
LNCipedia gene ID: lnc-RBBP6-4
Location (hg38): chr16:24610240-24640964
Strand: +
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 326 bp
Exons: 2
Sources: Broad Institute
Alternative transcript names: TCONS_00024354
Alternative gene names: XLOC_011676; linc-TNRC6A-2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score non-coding 
CPAT coding probability 13.51% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-RBBP6-4:2 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-RBBP6-1:1
3.1 lnc-RBBP6-1:1
4.0 lnc-RBBP6-1:1
4.1 lnc-TNRC6A-4:2
5.0 lnc-TNRC6A-4:2
5.1 lnc-SGF29-56:2
5.2 lnc-RBBP6-4:2