Transcript: lnc-RBBP6-1:4

Basic information

LNCipedia transcript ID: lnc-RBBP6-1:4 
LNCipedia gene ID: lnc-RBBP6-1
Location (hg38): chr16:24704559-24710647
Strand: +
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 5680 bp
Exons: 2
Sources: NONCODE v4; Hangauer et al., 2013
Alternative transcript names: NONHSAT141164; FPKM1_group_11494_transcript_3
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 14.9131 non-coding 
CPAT coding probability 0.43% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-RBBP6-1:4 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-TNRC6A-1:2
4.0 lnc-TNRC6A-1:2
4.1 lnc-TNRC6A-1:2
5.0 lnc-TNRC6A-1:2
5.1 lnc-SGF29-54:1
5.2 lnc-RBBP6-1:4