Transcript: lnc-RASSF2-5:2

Basic information

LNCipedia transcript ID: lnc-RASSF2-5:2 
LNCipedia gene ID: lnc-RASSF2-5
Location (hg38): chr20:4564329-4572090
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 457 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00028299; NONHSAT078281
Alternative gene names: XLOC_013639; linc-ADRA1D-3


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -69.2025 non-coding 
CPAT coding probability 0.53% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-RASSF2-5:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-PRNT-1:2
3.1 lnc-PRNT-1:2
4.0 lnc-PRNT-1:2
4.1 lnc-PRNT-1:2
5.0 lnc-PRNT-1:2
5.1 lnc-RNF24-18:2
5.2 lnc-RASSF2-5:2