Transcript: lnc-RASGRP4-1:1

Basic information

LNCipedia transcript ID: lnc-RASGRP4-1:1 
LNCipedia gene ID: lnc-RASGRP4-1
Location (hg38): chr19:38395075-38402918
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 7844 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000040922.1|HBMT00000736093.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 7.0838 non-coding 
CPAT coding probability 8.85% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-RASGRP4-1:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-RASGRP4-1:1
5.0 lnc-RASGRP4-1:1
5.1 lnc-DPF1-8:1
5.2 lnc-RASGRP4-1:1