Transcript: lnc-RASA1-2:5

Basic information

LNCipedia transcript ID: lnc-RASA1-2:5 
LNCipedia gene ID: lnc-RASA1-2
RefSeq ID: NR_105018
Location (hg38): chr5:87120148-87248021
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1474 bp
Exons: 4
Sources: Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_105018.1
Alternative gene names: LOC101929380


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 13.7726 non-coding 
CPAT coding probability 13.76% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-RASA1-2:5 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
5.0 lnc-MSH3-49:5
5.1 lnc-MSH3-49:5
5.2 lnc-RASA1-2:5