Transcript: lnc-RASA1-24:1

Basic information

LNCipedia transcript ID: lnc-RASA1-24:1 
LNCipedia gene ID: lnc-RASA1-24
Location (hg38): chr5:88711583-88731489
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1424 bp
Exons: 3
Sources: Nielsen et al.,2014
Alternative transcript names: l_2965_chr5:88007399-88027306_brain
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -104.9148 non-coding 
CPAT coding probability 0.45% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-RASA1-24:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-RASA1-24:1
4.0 lnc-RASA1-24:1
4.1 lnc-RASA1-24:1
5.0 lnc-RASA1-24:1
5.1 lnc-GPR150-96:1
5.2 lnc-RASA1-24:1