Transcript: lnc-RARRES2-1:1

Basic information

LNCipedia transcript ID: lnc-RARRES2-1:1 
LNCipedia gene ID: lnc-RARRES2-1
Location (hg38): chr7:150307612-150313245
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 2827 bp
Exons: 2
Sources: Biogazelle lncRNA chip; Ensembl release 64 - Sep 2011; NONCODE v4
Alternative transcript names: ENST00000515382; NONHSAT124101
Alternative gene names: ENSG00000249498; AC005586.2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 28.968 non-coding 
CPAT coding probability 1.08% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-RARRES2-1:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-RARRES2-1:1
3.1 lnc-RARRES2-1:1
4.0 lnc-RARRES2-1:1
4.1 lnc-RARRES2-1:1
5.0 lnc-RARRES2-1:1
5.1 lnc-KMT2C-52:1
5.2 lnc-RARRES2-1:1