Transcript: lnc-RARG-1:1

Basic information

LNCipedia transcript ID: lnc-RARG-1:1 
LNCipedia gene ID: lnc-RARG-1
Location (hg38): chr12:53250399-53252048
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1650 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000012025.1|ENCT00000102163.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 17.2985 non-coding 
CPAT coding probability 0.90% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-RARG-1:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-RARG-1:1
5.0 lnc-RARG-1:1
5.1 lnc-SP7-6:1
5.2 lnc-RARG-1:1