Transcript: lnc-RALGPS1-1:2

Basic information

LNCipedia transcript ID: lnc-RALGPS1-1:2 
LNCipedia gene ID: lnc-RALGPS1-1
Location (hg38): chr9:127235746-127237361
Strand: +
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 355 bp
Exons: 2
Sources: NONCODE v4
Alternative transcript names: NONHSAT134799
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -316.9152 non-coding 
CPAT coding probability 7.70% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-RALGPS1-1:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-RALGPS1-1:2
4.0 lnc-RALGPS1-1:2
4.1 lnc-RALGPS1-1:2
5.0 lnc-RALGPS1-1:2
5.1 lnc-PTPA-117:2
5.2 lnc-RALGPS1-1:2