Transcript: lnc-RALGAPA2-2:9

Basic information

LNCipedia transcript ID: lnc-RALGAPA2-2:9 
LNCipedia gene ID: lnc-RALGAPA2-2
Location (hg38): chr20:20253303-20253838
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 536 bp
Exons: 1
Sources: NONCODE v4
Alternative transcript names: NONHSAT078892
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 79.4363 coding 
CPAT coding probability 60.04% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-RALGAPA2-2:9 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-RALGAPA2-7:1
4.0 lnc-RALGAPA2-7:1
4.1 lnc-RALGAPA2-2:9
5.0 lnc-RALGAPA2-2:9
5.1 lnc-RRBP1-49:9
5.2 lnc-RALGAPA2-2:9