Transcript: lnc-RAD51C-5:1

Basic information

LNCipedia transcript ID: lnc-RAD51C-5:1 
LNCipedia gene ID: lnc-RAD51C-5
Location (hg38): chr17:58518783-58520162
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1380 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000264672.1|FTMT26800003427.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -11.3471 non-coding 
CPAT coding probability 2.23% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-RAD51C-5:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 SEPT4-AS1:10
5.0 SEPT4-AS1:10
5.1 lnc-PRR11-66:1
5.2 lnc-RAD51C-5:1