Transcript: lnc-RAD23B-11:1

Basic information

LNCipedia transcript ID: lnc-RAD23B-11:1 
LNCipedia gene ID: lnc-RAD23B-11
Location (hg38): chr9:107999568-108007385
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 3728 bp
Exons: 3
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00016127; NONHSAT133902
Alternative gene names: XLOC_007512; linc-ACTL7A-4


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -12.6054 non-coding 
CPAT coding probability 1.46% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-RAD23B-11:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-RAD23B-10:1
3.1 lnc-RAD23B-11:1
4.0 lnc-RAD23B-11:1
4.1 lnc-RAD23B-11:1
5.0 lnc-RAD23B-11:1
5.1 lnc-PRPF4-101:1
5.2 lnc-RAD23B-11:1