Transcript: lnc-PZP-5:1

Basic information

LNCipedia transcript ID: lnc-PZP-5:1 
LNCipedia gene ID: lnc-PZP-5
Location (hg38): chr12:9236421-9241384
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2973 bp
Exons: 2
Sources: Nielsen et al.,2014
Alternative transcript names: l_596_chr12:9389016-9393980_testes
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 1.197 non-coding 
CPAT coding probability 4.41% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-PZP-5:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-PZP-5:1
4.0 lnc-PZP-5:1
4.1 lnc-PZP-5:1
5.0 lnc-PZP-5:1
5.1 lnc-M6PR-11:1
5.2 lnc-PZP-5:1