Transcript: lnc-PWWP2B-1:4

Basic information

LNCipedia transcript ID: lnc-PWWP2B-1:4 
LNCipedia gene ID: lnc-PWWP2B-1
Location (hg38): chr10:132419006-132435534
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 15988 bp
Exons: 3
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000231705.1|ENCT00000051639.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 55.0405 non-coding 
CPAT coding probability 98.21% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-PWWP2B-1:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-PWWP2B-1:4
5.0 lnc-PWWP2B-1:4
5.1 lnc-MGMT-38:3
5.2 lnc-PWWP2B-1:4