Transcript: lnc-PTPN1-1:1
Basic information
LNCipedia transcript ID: lnc-PTPN1-1:1
LNCipedia gene ID: lnc-PTPN1-1
Ensembl Gene ID:
ENSG00000234693
Ensembl Transcript ID:
ENST00000452336
RefSeq ID:
NR_111906
Location (hg38): chr20:50645471-50660291
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 638 bp
Exons: 3
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Refseq - Dec 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018; Refseq - NCBI Annotation Release 106
Alternative transcript names: ENST00000452336.1; RP4-530I15.6-001; OTTHUMT00000079692.2; NONHSAT080316; NR_111906; NR_111906.1
Alternative gene names: ENSG00000234693.1; RP4-530I15.6; OTTHUMG00000032727.2; AL353653.1; LOC100506175
RNA sequence:
Structure:
Protein coding potential
In stringent set: yes
Locus conservation
| Locus conservation? |  |
 |
 |
 |
|---|---|---|---|---|
| lnc-PTPN1-1:1 | no | no | no | no |
Available literature
No linked literature available at this time.
LNCipedia transcript ID history
| LNCipedia version | LNCipedia transcript ID |
|---|---|
| 3.1 | lnc-PTPN1-1:1 |
| 4.0 | lnc-PTPN1-1:1 |
| 4.1 | lnc-PTPN1-1:1 |
| 5.0 | lnc-PTPN1-1:1 |
| 5.1 | lnc-SNAI1-29:1 |
| 5.2 | lnc-PTPN1-1:1 |