Transcript: lnc-PTBP3-8:3

Basic information

LNCipedia transcript ID: lnc-PTBP3-8:3 
LNCipedia gene ID: lnc-PTBP3-8
Location (hg38): chr9:112485564-112486673
Strand: -
Class: bidirectional
Sequence Ontology term:
Transcript size: 1110 bp
Exons: 1
Sources: NONCODE v4
Alternative transcript names: NONHSAT134018
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -94.9769 non-coding 
CPAT coding probability 2.92% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-PTBP3-8:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-C9orf147-1:3
4.0 lnc-C9orf147-1:3
4.1 lnc-C9orf147-1:3
5.0 lnc-C9orf147-1:3
5.1 lnc-SLC46A2-14:3
5.2 lnc-PTBP3-8:3