Transcript: lnc-PTBP3-7:1

Basic information

LNCipedia transcript ID: lnc-PTBP3-7:1 
LNCipedia gene ID: lnc-PTBP3-7
Location (hg38): chr9:112373264-112376055
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2792 bp
Exons: 1
Sources: Sun and Gadad et al., 2015
Alternative transcript names: LncRNA1867:1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 16.5755 non-coding 
CPAT coding probability 97.02% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-PTBP3-7:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 lnc-PTBP3-7:1
4.1 lnc-PTBP3-7:1
5.0 lnc-PTBP3-7:1
5.1 lnc-SLC46A2-18:1
5.2 lnc-PTBP3-7:1