Transcript: lnc-PRRT3-3:2

Basic information

LNCipedia transcript ID: lnc-PRRT3-3:2 
LNCipedia gene ID: lnc-PRRT3-3
Location (hg38): chr3:9931273-9933512
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 2068 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000063716.1|MICT00000237803.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -24.8108 non-coding 
CPAT coding probability 0.60% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-PRRT3-3:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-PRRT3-3:2
5.0 lnc-PRRT3-3:2
5.1 lnc-PRRT3-3:2
5.2 lnc-PRRT3-3:2