Transcript: lnc-PRRT1-1:8

Basic information

LNCipedia transcript ID: lnc-PRRT1-1:8 
LNCipedia gene ID: lnc-PRRT1-1
Location (hg38): chr6:32151981-32153960
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 620 bp
Exons: 3
Sources: NONCODE v4
Alternative transcript names: NONHSAT108881
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 36.3051 non-coding 
CPAT coding probability 3.21% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-PRRT1-1:8 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-AGPAT1-1:5
4.0 lnc-AGPAT1-1:5
4.1 lnc-AGPAT1-1:5
5.0 lnc-AGPAT1-1:5
5.1 lnc-DXO-6:8
5.2 lnc-PRRT1-1:8