Transcript: lnc-PRPF18-8:8

Basic information

LNCipedia transcript ID: lnc-PRPF18-8:8 
LNCipedia gene ID: lnc-PRPF18-8
Location (hg38): chr10:14074718-14088502
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 688 bp
Exons: 3
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000235410.1|MICT00000037493.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -5.2911 non-coding 
CPAT coding probability 0.22% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-PRPF18-8:8 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-PRPF18-8:8
5.0 lnc-PRPF18-8:8
5.1 lnc-NPY4R2-357:7
5.2 lnc-PRPF18-8:8