Transcript: lnc-PRORY-6:1

Basic information

LNCipedia transcript ID: lnc-PRORY-6:1 
LNCipedia gene ID: lnc-PRORY-6
Ensembl Gene ID: ENSG00000254488
Ensembl Transcript ID: ENST00000527562
Location (hg38): chrY:21038289-21044724
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 983 bp
Exons: 3
Sources: Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000527562; ENST00000527562.1; RP11-65G9.1-001; OTTHUMT00000386379.1; NONHSAT139645
Alternative gene names: ENSG00000254488; RP11-65G9.1; ENSG00000254488.1; OTTHUMG00000165821.1; AC007876.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score non-coding 
CPAT coding probability 29.80% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-PRORY-6:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-CYorf17-2:1
3.1 lnc-CYorf17-2:1
4.0 lnc-CYorf17-2:1
4.1 lnc-CYorf17-2:1
5.0 lnc-CYorf17-2:1
5.1 lnc-DAZ1-40:1
5.2 lnc-PRORY-6:1