Transcript: lnc-PRORY-1:1

Basic information

LNCipedia transcript ID: lnc-PRORY-1:1 
LNCipedia gene ID: lnc-PRORY-1
Location (hg38): chrY:21395148-21401562
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 534 bp
Exons: 5
Sources: Gencode v13; Ensembl release 68 - Jul 2012
Alternative transcript names: ENST00000444169.1; RBMY2EP-001; OTTHUMT00000100104.1; NR_001574
Alternative gene names: ENSG00000242300.1; RBMY2EP; OTTHUMG00000042037.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -5.2656 non-coding 
CPAT coding probability 49.67% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-PRORY-1:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-RBMY1E-1:1
4.0 lnc-RBMY1E-1:1
4.1 lnc-RBMY1E-1:1
5.0 lnc-RBMY1E-1:1
5.1 lnc-DAZ1-36:1
5.2 lnc-PRORY-1:1