Transcript: lnc-PROB1-1:2

Basic information

LNCipedia transcript ID: lnc-PROB1-1:2 
LNCipedia gene ID: lnc-PROB1-1
Location (hg38): chr5:139387569-139389883
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 1887 bp
Exons: 3
Sources: NONCODE v4
Alternative transcript names: NONHSAT104101
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 631.611 coding 
CPAT coding probability 74.80% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-PROB1-1:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-C5orf65-1:2
4.0 lnc-C5orf65-1:2
4.1 lnc-C5orf65-1:2
5.0 lnc-C5orf65-1:2
5.1 lnc-DND1-40:2
5.2 lnc-PROB1-1:2