Transcript: lnc-PRMT6-3:11

Basic information

LNCipedia transcript ID: lnc-PRMT6-3:11 
LNCipedia gene ID: lnc-PRMT6-3
Ensembl Gene ID: ENSG00000237480
Ensembl Transcript ID: ENST00000634868
Location (hg38): chr1:106038547-106124564
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1251 bp
Exons: 6
Sources: Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000634868.1
Alternative gene names: ENSG00000237480.2; RP5-947P14.1; AL355306.2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -34.6469 non-coding 
CPAT coding probability 0.26% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-PRMT6-3:11 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 lnc-PRMT6-3:11
4.1 lnc-PRMT6-3:11
5.0 lnc-PRMT6-3:11
5.1 lnc-GSTM5-54:9
5.2 lnc-PRMT6-3:11