Transcript: lnc-PRKN-18:2

Basic information

LNCipedia transcript ID: lnc-PRKN-18:2 
LNCipedia gene ID: lnc-PRKN-18
Location (hg38): chr6:163632058-163633768
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1317 bp
Exons: 2
Sources: Nielsen et al.,2014
Alternative transcript names: l_3314_chr6:164053089-164054800_testes
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -191.2347 non-coding 
CPAT coding probability 0.51% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-PRKN-18:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-AL078585.1-18:1
4.0 lnc-AL078585.1-18:1
4.1 lnc-AL078585.1-18:1
5.0 lnc-AL078585.1-18:1
5.1 lnc-PRKN-18:1
5.2 lnc-PRKN-18:2