Transcript: lnc-PRKD1-19:1

Basic information

LNCipedia transcript ID: lnc-PRKD1-19:1 
LNCipedia gene ID: lnc-PRKD1-19
Location (hg38): chr14:28131059-28134344
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 445 bp
Exons: 3
Sources: Nielsen et al.,2014
Alternative transcript names: l_959_chr14:28600264-28603550_testes
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -50.6273 non-coding 
CPAT coding probability 4.08% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-PRKD1-19:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-PRKD1-19:1
4.0 lnc-PRKD1-19:1
4.1 lnc-PRKD1-19:1
5.0 lnc-PRKD1-19:1
5.1 lnc-EFS-74:1
5.2 lnc-PRKD1-19:1