Transcript: lnc-PRIM2-13:2

Basic information

LNCipedia transcript ID: lnc-PRIM2-13:2 
LNCipedia gene ID: lnc-PRIM2-13
Location (hg38): chr6:58449985-58453883
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1688 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000084214.1|MICT00000305787.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -0.5103 non-coding 
CPAT coding probability 1.10% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-PRIM2-13:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-BAG2-13:2
5.0 lnc-BAG2-13:2
5.1 lnc-HCRTR2-22:2
5.2 lnc-PRIM2-13:2