Transcript: lnc-PRDM4-6:4

Basic information

LNCipedia transcript ID: lnc-PRDM4-6:4 
LNCipedia gene ID: lnc-PRDM4-6
Location (hg38): chr12:107882464-107887964
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 814 bp
Exons: 3
Sources: Nielsen et al.,2014
Alternative transcript names: l_721_chr12:108276240-108281710_testes
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -61.8662 non-coding 
CPAT coding probability 0.54% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-PRDM4-6:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-PRDM4-6:4
4.0 lnc-PRDM4-6:4
4.1 lnc-PRDM4-6:4
5.0 lnc-PRDM4-6:4
5.1 lnc-GPN3-47:5
5.2 lnc-PRDM4-6:4