Transcript: lnc-PRDM10-3:2

Basic information

LNCipedia transcript ID: lnc-PRDM10-3:2 
LNCipedia gene ID: lnc-PRDM10-3
Location (hg38): chr11:130067888-130069667
Strand: -
Class: bidirectional
Sequence Ontology term:
Transcript size: 1780 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000007480.1|HBMT00000261459.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -84.854 non-coding 
CPAT coding probability 9.57% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-PRDM10-3:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-PRDM10-3:2
5.0 lnc-PRDM10-3:2
5.1 lnc-ADAMTS8-7:2
5.2 lnc-PRDM10-3:2