Transcript: lnc-PRB1-1:7

Basic information

LNCipedia transcript ID: lnc-PRB1-1:7 
LNCipedia gene ID: lnc-PRB1-1
Location (hg38): chr12:11430252-11435142
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 311 bp
Exons: 3
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00020720; NONHSAT026941
Alternative gene names: XLOC_010018; linc-PRB2-1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -101.3354 non-coding 
CPAT coding probability 11.43% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-PRB1-1:7 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-PRB1-1:2
3.1 lnc-PRB1-1:7
4.0 lnc-PRB1-1:7
4.1 lnc-PRB1-1:7
5.0 lnc-PRB1-1:7
5.1 lnc-M6PR-50:8
5.2 lnc-PRB1-1:7