Transcript: lnc-PPP6C-1:2

Basic information

LNCipedia transcript ID: lnc-PPP6C-1:2 
LNCipedia gene ID: lnc-PPP6C-1
Location (hg38): chr9:125199534-125200469
Strand: -
Class: bidirectional
Sequence Ontology term:
Transcript size: 366 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000109782.1|HBMT00001493201.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -121.573 non-coding 
CPAT coding probability 0.78% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-PPP6C-1:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-PPP6C-1:2
5.0 lnc-PPP6C-1:2
5.1 lnc-ZBTB6-47:2
5.2 lnc-PPP6C-1:2