Transcript: lnc-PPP4R1-22:1

Basic information

LNCipedia transcript ID: lnc-PPP4R1-22:1 
LNCipedia gene ID: lnc-PPP4R1-22
Location (hg38): chr18:10677517-10681728
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 600 bp
Exons: 3
Sources: NONCODE v4
Alternative transcript names: NONHSAT057279
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 558.0346 coding 
CPAT coding probability 19.91% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-PPP4R1-22:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-RP11-677O4.1.1-9:1
4.0 lnc-RP11-677O4.1.1-9:1
4.1 lnc-RP11-677O4.1.1-9:1
5.0 lnc-RP11-677O4.1.1-9:1
5.1 lnc-SMAD2-293:1
5.2 lnc-PPP4R1-22:1