Transcript: lnc-PPP1R3G-8:1

Basic information

LNCipedia transcript ID: lnc-PPP1R3G-8:1 
LNCipedia gene ID: lnc-PPP1R3G-8
Location (hg38): chr6:5072593-5240496
Strand: +
Class: sense-overlapping
Sequence Ontology term: sense_overlap_ncRNA
Transcript size: 2931 bp
Exons: 2
Sources: Biogazelle lncRNA chip
Alternative transcript names: ENST00000512904
Alternative gene names: ENSG00000251561;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -5.1507 non-coding 
CPAT coding probability 2.04% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-PPP1R3G-8:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-PPP1R3G-1:1
3.1 lnc-PPP1R3G-1:1
4.0 LYRM4-AS1:17
4.1 LYRM4-AS1:17
5.0 LYRM4-AS1:17
5.1 lnc-PRPF4B-161:1
5.2 lnc-PPP1R3G-8:1