Transcript: lnc-PPP1R3D-8:1

Basic information

LNCipedia transcript ID: lnc-PPP1R3D-8:1 
LNCipedia gene ID: lnc-PPP1R3D-8
Location (hg38): chr20:59880319-59886811
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 580 bp
Exons: 8
Sources: NONCODE v4
Alternative transcript names: NONHSAT080628
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -112.0484 non-coding 
CPAT coding probability 0.07% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-PPP1R3D-8:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-PPP1R3D-8:1
4.0 lnc-PPP1R3D-8:1
4.1 lnc-PPP1R3D-8:1
5.0 lnc-PPP1R3D-8:1
5.1 lnc-SPATA2-128:1
5.2 lnc-PPP1R3D-8:1