Transcript: lnc-PPP1R14D-1:17

Basic information

LNCipedia transcript ID: lnc-PPP1R14D-1:17 
LNCipedia gene ID: lnc-PPP1R14D-1
Location (hg38): chr15:40779554-40780567
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 456 bp
Exons: 3
Sources: NONCODE v4
Alternative transcript names: NONHSAT041877
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -69.062 non-coding 
CPAT coding probability 1.24% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-PPP1R14D-1:17 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-DNAJC17-1:2
4.0 lnc-DNAJC17-1:2
4.1 lnc-DNAJC17-1:2
5.0 lnc-DNAJC17-1:2
5.1 lnc-VPS39-30:2
5.2 lnc-PPP1R14D-1:17